The report was generated using the JSEQ_scRNAseq single-cell analysis pipeline. For more information, please visit: https://github.com/jkubis96/JSEQ_scRNAseq


1 Analysis Configuration Parameters

Parameter Value
mt_per 25
scale_factor 1e+06
n_features 1500
c_res 0.5
heterogeneity var
mt_cssg FALSE
m_val 0.05
top_m 50
max_genes 1000
max_combine 1000
loss_val 0.05
s_factor 0.7
p_bin 0.1
drop TRUE
min_c 10

The parameters above were used during the current analysis.
If you need to apply different analysis conditions, modify the parameters in the configuration file.

Parameters description:

  • mt_per
    Maximum percentage of mitochondrial genes per cell.
    Default: 25%
  • down
    Lower threshold for the number of genes per cell.
    Default: NA (automatically computed if NA)
  • up
    Upper threshold for the number of genes per cell.
    Default: NA (automatically computed if NA)
  • scale_factor
    Scale factor used for data normalization.
  • n_features
    Number of variable features to detect for clustering.
  • c_res
    Clustering resolution — higher values produce more clusters.
  • heterogeneity
    Method for estimating cluster heterogeneity.
    Options: var (within-cluster variance), deg (deregulated gene profiles).
    Default: deg
  • mt_cssg
    Whether to include mitochondrial genes when creating subclasses and subtypes.
    Options: TRUE, FALSE.
    Default: FALSE
  • m_val
    Maximum p-value threshold for marker detection in advanced subtype analyses.
    Default: 0.05
  • top_m
    Maximum number of top markers used for naming clusters based on effect size metrics.
    Default: 50
  • max_genes
    Maximum number of input genes considered in cluster heterogeneity discovery.
    Default: 1000
  • max_combine
    Maximum number of initial combinations for each iteration during heterogeneity discovery.
    Default: 1000
  • loss_val
    Assigned value for potentially unclassified cells within a cluster.
  • s_factor
    Maximum split factor for gene occurrence in heterogeneity discovery (0.2–1).
    Default: 0.8
  • p_bin
    Minimum cell proportion required for population presence based on binomial test p-value.
    Default: 0.05
  • min_c
    Minimum cell proportion required for population presence as defined by the user (independent of binomial test).
    Default: 10
  • drop
    Boolean indicating whether to drop non-significant subtypes based on p_bin and min_c.
    Default: TRUE

The configuration file is available in the directory:
JSEQ_scRNAseq/requirements_file/config_file.conf

Additional configuration files for other analysis steps can also be found in:
JSEQ_scRNAseq/requirements_file

For more information, please visit:
https://github.com/jkubis96/JSEQ_scRNAseq



2 Cell content analysis

2.1 Read distribution across genomic features

2.2 Count (UMI) per barcode (cell)

2.3 Cell barcode knee plot

The above graph illustrates general trends and quality metrics at the initial stage of single-cell analysis; however, it does not represent the final number of detected cells.

2.4 Ratio of number of genes to counts

2.5 Number of genes and counts per cell

2.6 Percentage of ribosomal and mitochondrial genes [%]



3 Quality control of cell content

3.1 Genes per cell content & thresholds

3.2 Genes upper & lower thresholds per cell

3.3 Number of cells across different stages of analysis



4 Gene expression analysis across cells

4.1 Top highly variable genes in the dataset



5 Princilpe component selection

5.1 ElbowPlot - principal components cutoff

5.2 JackStrawPlot - PC significance



6 Cells clustering

6.1 UMAP clusters



7 Subclasses identification based on marker genes

7.1 PCA cisualization of subclasses

7.2 UMAP visualization of subclasses

7.3 Subclasses - cell composition


7.4 Subclasses markers - top 25


Top 25 merkers
genes pct_occurrence esm avg_logFC p_val cluster p_adj_bf p_adj_bh subclass
Cdk8 0.5163043 0.8428792 1.6671976 0 1 0 0 CTX Foxg1 Psmc2
Psmc2 0.5706522 0.8283922 1.5020303 0 1 0 0 CTX Foxg1 Psmc2
Il1rapl2 0.2771739 0.8179873 2.6835114 0 1 0 0 CTX Foxg1 Psmc2
Zfp263 0.5652174 0.7872441 1.4263980 0 1 0 0 CTX Foxg1 Psmc2
Marchf1 0.2934783 0.7856290 2.3621919 0 1 0 0 CTX Foxg1 Psmc2
Gm29865 0.1086957 0.7345408 7.5140925 0 1 0 0 CTX Foxg1 Psmc2
Slc17a9 0.1630435 0.7182142 3.5027108 0 1 0 0 CTX Foxg1 Psmc2
Fgfr2 0.3586957 0.7173216 1.8797641 0 1 0 0 CTX Foxg1 Psmc2
Scnn1g 0.3423913 0.7167129 1.9461092 0 1 0 0 CTX Foxg1 Psmc2
Dip2b 0.5869565 0.7153277 1.2358517 0 1 0 0 CTX Foxg1 Psmc2
Gnb1 0.2500000 0.7029870 2.4162267 0 1 0 0 CTX Foxg1 Psmc2
Igf2bp3 0.3967391 0.6976864 1.6749797 0 1 0 0 CTX Foxg1 Psmc2
Tmem132d.var1 0.3695652 0.6824800 1.7537638 0 1 0 0 CTX Foxg1 Psmc2
Has2os 0.1956522 0.6820444 2.7761024 0 1 0 0 CTX Foxg1 Psmc2
Bzw2 0.1739130 0.6748861 3.0392171 0 1 0 0 CTX Foxg1 Psmc2
Dclk2 0.1141304 0.6717572 4.6247132 0 1 0 0 CTX Foxg1 Psmc2
Dgki.var1 0.1304348 0.6676903 3.8228469 0 1 0 0 CTX Foxg1 Psmc2
Trak1 0.1847826 0.6675359 2.8645446 0 1 0 0 CTX Foxg1 Psmc2
Onecut2 0.4021739 0.6649999 1.5497518 0 1 0 0 CTX Foxg1 Psmc2
Hsp90b1 0.2119565 0.6578029 2.5595433 0 1 0 0 CTX Foxg1 Psmc2
Gm48228 0.5054348 0.6574583 1.2923493 0 1 0 0 CTX Foxg1 Psmc2
H3f3b 0.3750000 0.6532501 1.6299938 0 1 0 0 CTX Foxg1 Psmc2
Hnrnpa2b1 0.4510870 0.6523169 1.4148727 0 1 0 0 CTX Foxg1 Psmc2
Nlk 0.2119565 0.6500700 2.4812084 0 1 0 0 CTX Foxg1 Psmc2
Pafah1b2 0.2065217 0.6457487 2.5117257 0 1 0 0 CTX Foxg1 Psmc2
mt-Rnr2 0.8467492 0.0924332 0.0569244 0 0 0 0 STR Foxp1 Mt-rnr2


7.5 Heatmap of cell subclasses - log(CPM + 1)

7.6 Heatmap of cell subclasses - scale(log(CPM + 1))




8 Subtypes identification based on CSSG genes

8.1 UMAP visualization


8.2 Subtypes - cell composition


8.3 Subtypes markers - top 25


Top 25 markers
genes pct_occurrence esm avg_logFC p_val subtype p_adj_bf p_adj_bh cluster
Top1 1.0000000 3.7659358 3.6851888 0.0000000 CTX Emx1 Mt-rnr2 - Top1 0.0000000 0.0000000 0
Usp10 0.1818182 1.9618897 4.5877939 0.0000002 CTX Emx1 Mt-rnr2 - Top1 0.0000170 0.0000057 0
Rad18 0.2727273 1.8430327 3.8455094 0.0000001 CTX Emx1 Mt-rnr2 - Top1 0.0000110 0.0000055 0
Gm49692 0.1818182 1.7367339 4.2727438 0.0000010 CTX Emx1 Mt-rnr2 - Top1 0.0001007 0.0000201 0
Usp45 0.1818182 1.7314583 4.1746478 0.0000039 CTX Emx1 Mt-rnr2 - Top1 0.0003902 0.0000650 0
Xpr1 0.3636364 1.6810088 3.2037761 0.0000010 CTX Emx1 Mt-rnr2 - Top1 0.0000986 0.0000201 0
Gm49329 0.1818182 1.5282635 3.8296345 0.0000330 CTX Emx1 Mt-rnr2 - Top1 0.0032969 0.0003297 0
Rpl17-ps8 0.1818182 1.5120382 3.8778832 0.0000135 CTX Emx1 Mt-rnr2 - Top1 0.0013539 0.0001749 0
Rbm28 0.1818182 1.4443245 3.8038750 0.0000140 CTX Emx1 Mt-rnr2 - Top1 0.0013990 0.0001749 0
Phip 0.2727273 1.4339640 3.2100335 0.0000199 CTX Emx1 Mt-rnr2 - Top1 0.0019876 0.0002208 0
Gm28578 0.1818182 1.3927218 3.6224250 0.0000722 CTX Emx1 Mt-rnr2 - Top1 0.0072198 0.0006563 0
Hsph1 0.1818182 1.2617222 3.3692668 0.0003013 CTX Emx1 Mt-rnr2 - Top1 0.0301337 0.0024308 0
Fam13b 0.1818182 1.2212128 3.3212363 0.0003160 CTX Emx1 Mt-rnr2 - Top1 0.0316006 0.0024308 0
Srgap3 0.1818182 1.1845182 3.1520599 0.0011641 CTX Emx1 Mt-rnr2 - Top1 0.1164052 0.0072753 0
Ccdc186 0.1818182 1.1523637 3.1949978 0.0005580 CTX Emx1 Mt-rnr2 - Top1 0.0557996 0.0039857 0
Bcl11a 0.2727273 1.1086645 2.4711363 0.0022056 CTX Emx1 Mt-rnr2 - Top1 0.2205629 0.0110281 0
Fzd3 0.1818182 1.0741714 2.9329504 0.0024731 CTX Emx1 Mt-rnr2 - Top1 0.2473076 0.0117766 0
1810013L24Rik 0.1818182 1.0444637 2.9310863 0.0019706 CTX Emx1 Mt-rnr2 - Top1 0.1970583 0.0103715 0
Zfp652 0.1818182 1.0371919 2.8896185 0.0026543 CTX Emx1 Mt-rnr2 - Top1 0.2654324 0.0120651 0
Fgf14 0.1818182 1.0239208 3.0349758 0.0006231 CTX Emx1 Mt-rnr2 - Top1 0.0623066 0.0041538 0
Trip12 0.1818182 1.0030969 2.9168633 0.0014452 CTX Emx1 Mt-rnr2 - Top1 0.1445180 0.0085011 0
Zfand6 0.1818182 0.9897319 2.8943992 0.0015320 CTX Emx1 Mt-rnr2 - Top1 0.1532050 0.0085114 0
Eif3c 0.1818182 0.9764785 2.7077842 0.0054158 CTX Emx1 Mt-rnr2 - Top1 0.5415839 0.0235471 0
Ube2e3 0.1818182 0.9274260 2.6200332 0.0076244 CTX Emx1 Mt-rnr2 - Top1 0.7624410 0.0316631 0
Akap6 0.1818182 0.8878423 2.5429118 0.0100114 CTX Emx1 Mt-rnr2 - Top1 1.0000000 0.0362557 0
Calm2 1.0000000 3.6186165 3.5432943 0.0000000 CTX Foxg1 Mt-rnr2 - Calm2 0.0000000 0.0000000 0
Rad54l 0.1333333 1.8670124 5.4110330 0.0000000 CTX Foxg1 Mt-rnr2 - Calm2 0.0000000 0.0000000 0
Atp2b4 0.1333333 1.7610680 5.2433912 0.0000000 CTX Foxg1 Mt-rnr2 - Calm2 0.0000000 0.0000000 0
Uck2 0.1333333 1.5315585 4.4021024 0.0000022 CTX Foxg1 Mt-rnr2 - Calm2 0.0002834 0.0000368 0
Ubr4 0.1333333 1.4906658 4.6640327 0.0000000 CTX Foxg1 Mt-rnr2 - Calm2 0.0000018 0.0000004 0
Txnl4a 0.1333333 1.4634068 4.3302828 0.0000023 CTX Foxg1 Mt-rnr2 - Calm2 0.0002943 0.0000368 0
Fndc1 0.1333333 1.4381984 4.4238640 0.0000003 CTX Foxg1 Mt-rnr2 - Calm2 0.0000341 0.0000068 0
Naa20 0.1333333 1.3958780 4.2303163 0.0000022 CTX Foxg1 Mt-rnr2 - Calm2 0.0002834 0.0000368 0
Dnajc2 0.2000000 1.3592223 3.4105592 0.0000213 CTX Foxg1 Mt-rnr2 - Calm2 0.0027232 0.0003026 0
Fndc7 0.1333333 1.2242026 3.7915333 0.0000441 CTX Foxg1 Mt-rnr2 - Calm2 0.0056416 0.0005642 0
Krit1 0.1333333 1.1013434 3.4807667 0.0003234 CTX Foxg1 Mt-rnr2 - Calm2 0.0413960 0.0031001 0
Cnpy2 0.1333333 1.0992247 3.3359165 0.0011081 CTX Foxg1 Mt-rnr2 - Calm2 0.1418360 0.0067541 0
Adgrv1.var1 0.1333333 1.0931191 3.6014202 0.0000495 CTX Foxg1 Mt-rnr2 - Calm2 0.0063414 0.0005765 0
Cald1 0.1333333 1.0292977 3.3048524 0.0006570 CTX Foxg1 Mt-rnr2 - Calm2 0.0840990 0.0047743 0
1110051M20Rik 0.1333333 1.0256229 3.4305454 0.0001424 CTX Foxg1 Mt-rnr2 - Calm2 0.0182254 0.0015188 0
H2bu2 0.1333333 1.0182346 3.3449184 0.0003391 CTX Foxg1 Mt-rnr2 - Calm2 0.0434019 0.0031001 0
Ndufa5 0.1333333 1.0035131 3.1990836 0.0011081 CTX Foxg1 Mt-rnr2 - Calm2 0.1418360 0.0067541 0
Draxin 0.1333333 1.0030619 3.2533620 0.0006291 CTX Foxg1 Mt-rnr2 - Calm2 0.0805297 0.0047743 0
Snf8 0.1333333 0.9985945 3.2546890 0.0006429 CTX Foxg1 Mt-rnr2 - Calm2 0.0822963 0.0047743 0
Stx12 0.1333333 0.9810491 3.2273610 0.0006714 CTX Foxg1 Mt-rnr2 - Calm2 0.0859382 0.0047743 0
Rprm 0.1333333 0.9578985 3.1897512 0.0007318 CTX Foxg1 Mt-rnr2 - Calm2 0.0936758 0.0049303 0
Eif2s1 0.1333333 0.9377607 3.1000077 0.0012244 CTX Foxg1 Mt-rnr2 - Calm2 0.1567267 0.0068142 0
Pdcd4 0.1333333 0.9306731 2.9882483 0.0031147 CTX Foxg1 Mt-rnr2 - Calm2 0.3986825 0.0153339 0
Bmi1 0.1333333 0.9196774 3.0634153 0.0011766 CTX Foxg1 Mt-rnr2 - Calm2 0.1506051 0.0068142 0
Polr1b 0.1333333 0.8984223 2.9749447 0.0019799 CTX Foxg1 Mt-rnr2 - Calm2 0.2534264 0.0105594 0
Prkca.var1 1.0000000 1.7502040 1.7106561 0.0000000 CTX Foxg1 Mt-rnr2 - Prkca.var1 0.0000000 0.0000000 0
Adgrl3 1.0000000 1.2749370 1.3535327 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Psmc2 0.7171717 1.0788935 1.6165573 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Scnn1g 0.4545455 0.9369266 2.0354621 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Hnrnpa1 0.3737374 0.9274482 2.2958504 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Cdk8 0.5959596 0.9162568 1.5850372 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Map4k4 0.2828283 0.8966278 2.7036719 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Gm48228 0.6363636 0.8935436 1.4728877 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Rcn2 0.1212121 0.8527394 5.1980890 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Smc4 0.3434343 0.8466876 2.2205598 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Zfp263 0.6262626 0.8448242 1.3983849 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Bzw2 0.2323232 0.8446007 2.8891877 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Canx 0.2020202 0.8427973 3.1983886 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Dpp10.var1 0.1515152 0.8416582 3.8797508 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Psmd11 0.2626263 0.8416108 2.6519556 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Igf2bp3 0.4747475 0.8278703 1.7172626 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Pvr 0.3030303 0.8254866 2.3446528 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Grtp1 0.2626263 0.8237552 2.6084240 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Marchf1 0.3333333 0.8142622 2.0920030 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Il1rapl2 0.3131313 0.8091989 2.2482603 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Tmem132d.var1 0.4545455 0.8085982 1.7551273 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Ccnl2 0.2121212 0.8072236 2.9276187 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Onecut2 0.4848485 0.8054964 1.6210777 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Eif2s3y 0.1212121 0.8053556 4.5216704 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Tor3a 0.4242424 0.8004806 1.8012816 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
4930555F03Rik 0.1818182 0.7900857 3.1864361 0.0000000 CTX Foxg1 Psmc2 - Adgrl3 0.0000000 0.0000000 1
Epn2 0.3076923 3.6067256 6.4277875 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gm10052 0.1538462 3.0371476 7.9327889 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gm37959 0.1538462 3.0330976 8.0403700 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Cd3eap 0.1538462 3.0321485 8.0392136 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Tgfb2 0.1538462 3.0314188 8.0292657 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
E4f1 0.1538462 3.0313901 7.8668778 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Nkiras1 0.1538462 3.0313901 7.8668778 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
4930412C18Rik 0.1538462 3.0274540 8.0836113 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Copg2 1.0000000 2.9789378 3.3554883 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Lrp11 0.2307692 2.9443779 6.4657884 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Nup85 0.1538462 2.5448023 6.3800794 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gpc3.var1 0.1538462 2.4615840 6.2645800 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Sv2a 0.2307692 2.3404001 5.1476127 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
AW822252 0.1538462 2.3234612 6.0983311 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gm2237 0.1538462 2.2921070 5.7115295 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Zfp933 0.1538462 2.2277144 5.6257134 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gm31727 0.1538462 2.1758629 5.9586373 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Ppp1r3e 0.1538462 2.1636116 5.9319378 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Nr3c1 0.1538462 2.1614250 5.9311293 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gosr2 0.1538462 2.0854050 5.8151496 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Pcdh10 0.2307692 2.0827674 4.6756524 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Stxbp2 0.1538462 2.0412365 5.7717229 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Gm18795 0.1538462 2.0203759 5.3736283 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Slc12a5 0.1538462 2.0144379 5.3862406 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Coa3 0.1538462 2.0094656 5.4152036 0.0000000 CTX Foxg1 Psmc2 - Copg2 0.0000000 0.0000000 1
Ofcc1.var1 0.2000000 3.5717880 7.0449405 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Rdh11 0.2000000 3.2206090 6.6174453 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Fabp7 1.0000000 3.1647088 3.4602454 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Itm2a 0.2000000 2.9107132 6.3754820 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Ndufaf5 0.2000000 2.8922155 6.3595980 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Zfp68 0.3000000 2.7303370 5.1454593 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Xrcc1 0.2000000 2.6976348 5.8013371 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Mir9-3hg 0.3000000 2.6727648 4.7332630 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Usp39 0.2000000 2.6171552 5.7641123 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Hivep1.var1 0.2000000 2.5810801 5.7191551 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Mdn1 0.3000000 2.5636680 5.0162220 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Fcho2 0.2000000 2.5582371 5.7067181 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Ndc80 0.2000000 2.5393279 5.6739810 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Slf1 0.3000000 2.4150639 4.8057725 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Chst9 0.2000000 2.4076620 5.5736567 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Hmbox1 0.2000000 2.4043011 5.1498244 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000001 0.0000000 1
Zzef1 0.2000000 2.3902959 5.5426263 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Nfrkb 0.2000000 2.3357746 5.4883873 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Tmem35a 0.3000000 2.3254576 4.5480092 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Nfyb 0.3000000 2.2838997 4.3828709 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000001 0.0000000 1
Ube3b 0.2000000 2.2754823 5.2054238 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000000 0.0000000 1
Zfp146 0.2000000 2.2413818 5.0230947 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000001 0.0000000 1
Gm5796 0.2000000 2.2373932 5.0304504 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000001 0.0000000 1
Mtfr1l 0.2000000 2.1967367 4.9936756 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000001 0.0000000 1
Hibch 0.2000000 2.1938768 4.9957051 0.0000000 CTX Foxg1 Psmc2 - Fabp7 0.0000001 0.0000000 1
Ido2 0.5714286 5.6594897 6.5852649 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Gm33594 0.5000000 4.9650297 6.4160900 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Gabra6 0.3571429 4.7006448 7.7349054 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Lipn 0.4285714 4.3787725 6.2601810 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Col6a4 0.5000000 4.3516959 5.8268381 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Gm29865 0.5714286 4.2617581 5.3380820 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
4930556G01Rik 0.5714286 4.0551583 5.1827257 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Pde6a 0.6428571 4.0370328 4.9412184 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Capn13 0.5000000 3.9201970 5.4083088 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Grm7 1.0000000 3.6686894 3.6885580 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Nfix 0.5714286 3.6583939 4.8240478 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Cnga3 0.3571429 3.6131000 6.1005043 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Onecut3 0.2142857 3.5787302 8.6340710 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Dgki.var1 0.5714286 3.5779502 4.6993850 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Rassf6 0.4285714 3.5225713 5.3674312 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Xylt1 0.3571429 3.4765064 5.6866617 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Gm18985 0.4285714 3.4760831 5.3401927 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Adamtsl1.var1 0.2857143 3.4623353 6.4707861 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Wnt2 0.3571429 3.4098515 5.6436674 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Slc17a9 0.6428571 3.3973363 4.2646618 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Gm40375 0.4285714 3.3139894 5.0819081 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Fam71e2 0.3571429 3.3080985 5.5761987 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Dach2.var1 0.4285714 3.3013726 5.0666525 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Gm48913 0.2857143 3.2564332 6.2802040 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Scn1a 0.5000000 3.2545020 4.6337608 0.0000000 CTX Tbr1 Psmc2 - Grm7 0.0000000 0.0000000 1
Ctnna2.var1 1.0000000 4.0153393 3.8317778 0.0000000 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0000000 0.0000000 0
Lrpap1 0.1176471 1.9004473 6.0656715 0.0000000 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0000000 0.0000000 0
Dtd1 0.2352941 1.7657727 4.2376659 0.0000000 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0000000 0.0000000 0
A430073D23Rik 0.1176471 1.5304743 5.0290594 0.0000000 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0000004 0.0000001 0
Gcnt2 0.1176471 1.2708623 4.2480453 0.0000016 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0003024 0.0000524 0
Ubxn8 0.1176471 1.2593816 4.0051860 0.0000499 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0092271 0.0006785 0
1700102P08Rik 0.1764706 1.2225386 3.4798972 0.0000059 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0010841 0.0001549 0
Gramd4 0.1176471 1.2168707 4.1794890 0.0000017 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0003145 0.0000524 0
Pakap 0.2352941 1.1945276 2.9622420 0.0000156 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0028910 0.0003212 0
Gm15772 0.1176471 1.1075925 3.8694863 0.0000123 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0022686 0.0002836 0
Ttc26 0.1176471 1.0855508 3.7274523 0.0000513 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0094989 0.0006785 0
Bhlhe22 0.1176471 1.0750885 3.7229408 0.0000499 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0092271 0.0006785 0
Il31ra 0.1176471 1.0741526 3.7081082 0.0000499 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0092271 0.0006785 0
Adarb2 0.1764706 1.0566985 3.1558874 0.0000356 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0065925 0.0006593 0
Brk1 0.1176471 1.0529725 3.5855556 0.0001615 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0298776 0.0017030 0
Syne1.var1 0.1176471 1.0295740 3.5555302 0.0001615 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0298776 0.0017030 0
Ten1 0.1176471 1.0226258 3.5332707 0.0001657 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0306542 0.0017030 0
Mien1 0.1176471 1.0009690 3.4339780 0.0003967 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0733887 0.0037418 0
Fmnl2 0.5294118 0.9633827 1.6058748 0.0000968 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0179031 0.0011935 0
Wdr72.var1 0.1176471 0.9553893 3.3481257 0.0004250 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0786320 0.0037418 0
Prpf40a 0.1764706 0.9480650 2.7293665 0.0008848 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.1636945 0.0065615 0
Gtf2ird1 0.1176471 0.9467659 3.3335095 0.0004349 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.0804562 0.0037418 0
Gm10288 0.1176471 0.9382663 3.1848914 0.0015738 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.2911561 0.0107836 0
Rab3ip 0.1176471 0.9034225 3.1878827 0.0008664 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.1602802 0.0065615 0
Klhl7 0.1176471 0.9005233 3.0656622 0.0027093 HIP Lhx2 Mt-rnr2 - Ctnna2.var1 0.5012127 0.0161682 0
Rpl41 1.0000000 3.3435986 3.3758466 0.0000000 HIP Lhx2 Mt-rnr2 - Rpl41 0.0000000 0.0000000 0
Plcd3 0.1333333 1.5516923 4.7448224 0.0000000 HIP Lhx2 Mt-rnr2 - Rpl41 0.0000019 0.0000010 0
Gm10076 0.2000000 1.4365888 3.5843632 0.0000049 HIP Lhx2 Mt-rnr2 - Rpl41 0.0007063 0.0002354 0
Gm33366 0.1333333 1.3986914 4.1209192 0.0000117 HIP Lhx2 Mt-rnr2 - Rpl41 0.0016807 0.0004202 0
Phka2 0.1333333 1.2537847 3.8356424 0.0000441 HIP Lhx2 Mt-rnr2 - Rpl41 0.0063468 0.0012694 0
Use1 0.1333333 1.1650485 3.5506459 0.0002871 HIP Lhx2 Mt-rnr2 - Rpl41 0.0413487 0.0050532 0
Uqcrc1 0.1333333 1.1350248 3.4498528 0.0005894 HIP Lhx2 Mt-rnr2 - Rpl41 0.0848691 0.0064465 0
Pkn2 0.1333333 1.1033280 3.3996646 0.0006024 HIP Lhx2 Mt-rnr2 - Rpl41 0.0867395 0.0064465 0
Ggnbp2 0.1333333 1.0969191 3.5273098 0.0001351 HIP Lhx2 Mt-rnr2 - Rpl41 0.0194588 0.0028535 0
Vamp2 0.1333333 1.0952056 3.4654937 0.0003158 HIP Lhx2 Mt-rnr2 - Rpl41 0.0454792 0.0050532 0
Zfp862-ps 0.1333333 1.0592108 3.4762275 0.0001387 HIP Lhx2 Mt-rnr2 - Rpl41 0.0199748 0.0028535 0
Tax1bp1 0.1333333 1.0379096 3.3062032 0.0006429 HIP Lhx2 Mt-rnr2 - Rpl41 0.0925834 0.0064465 0
Zzz3 0.1333333 1.0237939 3.2868739 0.0006024 HIP Lhx2 Mt-rnr2 - Rpl41 0.0867395 0.0064465 0
Arf2 0.1333333 1.0103144 3.2084900 0.0011305 HIP Lhx2 Mt-rnr2 - Rpl41 0.1627933 0.0095761 0
Qrich1 0.1333333 1.0085289 3.2732503 0.0006714 HIP Lhx2 Mt-rnr2 - Rpl41 0.0966805 0.0064465 0
Rpa1 0.1333333 0.9366926 3.1530525 0.0007163 HIP Lhx2 Mt-rnr2 - Rpl41 0.1031433 0.0064465 0
Galnt1 0.1333333 0.9163819 3.0186120 0.0021312 HIP Lhx2 Mt-rnr2 - Rpl41 0.3068917 0.0153446 0
Kpna3 0.1333333 0.9159744 3.1197454 0.0007010 HIP Lhx2 Mt-rnr2 - Rpl41 0.1009457 0.0064465 0
Acbd5 0.1333333 0.9136422 3.0590296 0.0013255 HIP Lhx2 Mt-rnr2 - Rpl41 0.1908729 0.0106040 0
Lrp6 0.1333333 0.9002193 2.8979171 0.0046385 HIP Lhx2 Mt-rnr2 - Rpl41 0.6679378 0.0255161 0
Hectd4 0.1333333 0.8881731 2.9722620 0.0020924 HIP Lhx2 Mt-rnr2 - Rpl41 0.3013063 0.0153446 0
Aff4 0.1333333 0.8867114 2.8726353 0.0046385 HIP Lhx2 Mt-rnr2 - Rpl41 0.6679378 0.0255161 0
Birc5 0.1333333 0.8688422 2.8924832 0.0032234 HIP Lhx2 Mt-rnr2 - Rpl41 0.4641704 0.0221034 0
Lrrc4c 0.1333333 0.8616264 2.7573008 0.0091762 HIP Lhx2 Mt-rnr2 - Rpl41 1.0000000 0.0367049 0
Tnfrsf8 0.1333333 0.8588469 2.8256632 0.0047895 HIP Lhx2 Mt-rnr2 - Rpl41 0.6896934 0.0255161 0
Sypl 0.2307692 3.8943536 8.4340841 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Camk1d.var1 0.2307692 3.1100190 6.2728287 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Nedd4 1.0000000 3.0461207 3.3971364 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
D030055H07Rik 0.1538462 3.0378029 7.7549539 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
1110015O18Rik 0.1538462 3.0377135 7.7572262 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Lrrn3 0.1538462 3.0356593 7.8319393 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Stimate 0.1538462 3.0257055 7.9022566 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Pwwp3b 0.1538462 3.0160390 7.9031674 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Psmd9 0.1538462 3.0064944 7.9395663 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Gm50476 0.3076923 2.7576184 5.1983197 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Ddr1 0.2307692 2.6247149 5.5582843 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Hdac1 0.2307692 2.6216634 5.8038396 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Tbc1d8 0.1538462 2.5086117 6.3274516 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Nhlrc2 0.1538462 2.4983381 6.3103071 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Gm47431 0.1538462 2.4881418 6.2922846 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Arpc1a 0.3846154 2.4548085 4.4082375 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Klf6 0.1538462 2.4451991 6.2280616 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Gm41804 0.1538462 2.4441110 6.1939192 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Septin6 0.3076923 2.4339225 4.7492926 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Hinfp 0.1538462 2.4250620 6.1673333 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Coa4 0.1538462 2.3996790 6.1138816 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Cdr1os 0.1538462 2.3634717 6.1441565 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Zfp787 0.1538462 2.3386837 6.0491070 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Tbcd 0.2307692 2.3104565 5.2827458 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Slc4a8 0.1538462 2.2863405 6.0363387 0.0000000 HIP Lhx2 Psmc2 - Nedd4 0.0000000 0.0000000 1
Ccdc88a 1.0000000 4.8892886 4.3038108 0.0000000 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000000 0.0000000 0
Slx1b 0.1818182 3.2009365 6.8836319 0.0000000 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000000 0.0000000 0
Rlim 0.1818182 2.0547270 4.8033201 0.0000000 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000011 0.0000002 0
Sccpdh 0.1818182 2.0502801 4.9384062 0.0000000 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000001 0.0000000 0
Metap1d 0.1818182 2.0271764 4.7750275 0.0000000 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000011 0.0000002 0
Epb41l5 0.1818182 1.8086043 4.4374428 0.0000002 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000091 0.0000015 0
Lhx6 0.1818182 1.7610508 4.3065146 0.0000010 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0000564 0.0000081 0
Cacna1c.var1 0.1818182 1.4781287 3.8400122 0.0000127 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0007100 0.0000888 0
Kmt2c 0.1818182 1.2618382 3.3283112 0.0004883 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0273434 0.0027343 0
Fam13b 0.1818182 1.2510538 3.3564956 0.0002873 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0160893 0.0017877 0
4930519F16Rik 0.1818182 1.0928730 3.0292030 0.0012475 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.0698591 0.0063508 0
Dclk1 0.2727273 1.0689811 2.3708908 0.0040471 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.2266351 0.0161882 0
Mtch1 0.1818182 1.0441826 2.8663577 0.0033639 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.1883783 0.0156982 0
Camta2 0.1818182 0.9849131 2.7555347 0.0047485 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.2659176 0.0177278 0
Gm28905 0.1818182 0.9431914 2.7249961 0.0037204 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.2083397 0.0160261 0
Csnk2a1 0.1818182 0.9304498 2.6245175 0.0074045 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.4146503 0.0259156 0
R3hdm1 0.1818182 0.8832224 2.4544178 0.0157751 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.8834059 0.0490781 0
Hbb-y 0.1818182 0.8562713 2.4868720 0.0097361 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.5452205 0.0320718 0
Prmt1 0.1818182 0.8342361 2.3824843 0.0167897 MGE Lhx6 Mt-rnr2 - Ccdc88a 0.9402212 0.0494853 0
Nono 0.1818182 0.8259815 2.2902136 0.0292914 MGE Lhx6 Mt-rnr2 - Ccdc88a 1.0000000 0.0820159 0
Lsm12 0.1818182 0.7163526 2.1186857 0.0355058 MGE Lhx6 Mt-rnr2 - Ccdc88a 1.0000000 0.0946822 0
Epha5 1.0000000 3.9251751 3.7508726 0.0000000 MGE Lhx6 Mt-rnr2 - Epha5 0.0000000 0.0000000 0
Mpv17 0.1500000 1.7376626 5.1028095 0.0000000 MGE Lhx6 Mt-rnr2 - Epha5 0.0000000 0.0000000 0
Sergef.var1 0.1500000 1.6182569 4.9062368 0.0000000 MGE Lhx6 Mt-rnr2 - Epha5 0.0000000 0.0000000 0
Acbd3 0.1500000 1.3190494 4.0645557 0.0000001 MGE Lhx6 Mt-rnr2 - Epha5 0.0000042 0.0000011 0
Fam110b 0.1500000 1.1851918 3.6093755 0.0000057 MGE Lhx6 Mt-rnr2 - Epha5 0.0002915 0.0000583 0
Galnt13 0.1500000 1.0068795 3.1617915 0.0000829 MGE Lhx6 Mt-rnr2 - Epha5 0.0042303 0.0007050 0
Fbxo17 0.2500000 0.8546753 2.2187861 0.0003333 MGE Lhx6 Mt-rnr2 - Epha5 0.0169978 0.0024283 0
Ndufs4 0.1500000 0.8283971 2.5508060 0.0041427 MGE Lhx6 Mt-rnr2 - Epha5 0.2112788 0.0234754 0
Cnot7 0.1500000 0.7576790 2.4522113 0.0034485 MGE Lhx6 Mt-rnr2 - Epha5 0.1758756 0.0219845 0
Mapk10.var1 0.1500000 0.7350808 2.3653001 0.0063254 MGE Lhx6 Mt-rnr2 - Epha5 0.3225949 0.0322595 0
Osbpl9 0.1500000 0.6866201 2.2470984 0.0082320 MGE Lhx6 Mt-rnr2 - Epha5 0.4198342 0.0381667 0
Atp5c1 0.1500000 0.6612287 2.1537949 0.0120962 MGE Lhx6 Mt-rnr2 - Epha5 0.6169054 0.0474543 0
Gm47034 0.3000000 0.6001269 1.4504528 0.0103003 MGE Lhx6 Mt-rnr2 - Epha5 0.5253170 0.0437764 0
Cdh13.var1 1.0000000 3.2066776 3.3406930 0.0000000 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.0000000 0.0000000 0
Prpf38b 0.1500000 0.7395906 2.3472123 0.0075710 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.2876990 0.0470253 0
Eif3f 0.1500000 0.7354302 2.3591898 0.0057947 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.2201979 0.0470253 0
Mbtd1 0.1500000 0.7006805 2.2711860 0.0076109 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.2892140 0.0470253 0
Runx1t1 0.1500000 0.6820869 2.1715600 0.0140550 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.5340919 0.0667615 0
Cdh23.var1 1.0000000 0.6535392 0.3320156 0.0000046 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.0001755 0.0000877 0
Cux2 0.2000000 0.6487552 1.8653075 0.0086625 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.3291768 0.0470253 0
Akap8 0.4500000 0.6247158 1.1120568 0.0042115 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.1600375 0.0470253 0
Nucks1 0.1500000 0.6213733 2.0348659 0.0172266 STR Foxp1 Mt-rnr2 - Cdh13.var1 0.6546094 0.0727344 0
Olfr986 0.1500000 0.5671179 1.8695136 0.0280960 STR Foxp1 Mt-rnr2 - Cdh13.var1 1.0000000 0.1063829 0
Nbea.var1 0.2000000 0.5426413 1.5525345 0.0335946 STR Foxp1 Mt-rnr2 - Cdh13.var1 1.0000000 0.1063829 0
Dtnb 0.3000000 0.4946274 1.1838818 0.0321136 STR Foxp1 Mt-rnr2 - Cdh13.var1 1.0000000 0.1063829 0
Cracd 1.0000000 3.0644071 3.1658868 0.0000000 STR Foxp1 Mt-rnr2 - Cracd 0.0000000 0.0000000 0
Gpatch8 0.1428571 0.8744434 2.6629328 0.0044608 STR Foxp1 Mt-rnr2 - Cracd 0.2185812 0.0686277 0
Tsc22d3 0.1428571 0.6734665 2.3927534 0.0023467 STR Foxp1 Mt-rnr2 - Cracd 0.1149898 0.0574949 0
Tspan3 0.1428571 0.6411841 2.1698103 0.0109418 STR Foxp1 Mt-rnr2 - Cracd 0.5361480 0.1072296 0
Akap8 0.4761905 0.6240594 1.1123602 0.0056023 STR Foxp1 Mt-rnr2 - Cracd 0.2745107 0.0686277 0
Kpna1 0.1428571 0.5619445 1.9620207 0.0179025 STR Foxp1 Mt-rnr2 - Cracd 0.8772244 0.1322367 0
Gm33201 0.1428571 0.5546133 1.9496212 0.0188910 STR Foxp1 Mt-rnr2 - Cracd 0.9256568 0.1322367 0
Dtnb 0.2857143 0.5152813 1.2197650 0.0285313 STR Foxp1 Mt-rnr2 - Cracd 1.0000000 0.1747545 0
Adgrl3 0.5714286 0.3192297 0.4335612 0.0340702 STR Foxp1 Mt-rnr2 - Cracd 1.0000000 0.1854935 0
Dcx 1.0000000 4.2789978 3.9580017 0.0000000 STR Foxp1 Mt-rnr2 - Dcx 0.0000000 0.0000000 0
Nup50 0.1428571 1.2752660 3.6818660 0.0001570 STR Foxp1 Mt-rnr2 - Dcx 0.0108330 0.0036110 0
Tent4b 0.1428571 1.2733877 3.7506807 0.0000612 STR Foxp1 Mt-rnr2 - Dcx 0.0042252 0.0021126 0
Psme4 0.1428571 1.1577808 3.4683382 0.0003534 STR Foxp1 Mt-rnr2 - Dcx 0.0243822 0.0060956 0
Rbbp7 0.1428571 1.1221404 3.2918693 0.0011076 STR Foxp1 Mt-rnr2 - Dcx 0.0764228 0.0127371 0
Rpl37a 0.2142857 1.0673895 2.7759832 0.0004948 STR Foxp1 Mt-rnr2 - Dcx 0.0341378 0.0068276 0
Kcnn3 0.1428571 1.0531078 3.1481305 0.0018387 STR Foxp1 Mt-rnr2 - Dcx 0.1268726 0.0181247 0
Ptprd.var1 0.2142857 0.7776332 2.0555217 0.0150174 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.1295253 0
Nsg1 0.1428571 0.7709517 2.4643509 0.0174664 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.1339090 0
Trim2 0.2142857 0.6801005 1.8214957 0.0296146 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.1947639 0
Prpf38b 0.1428571 0.6492051 2.1503693 0.0387280 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.2055563 0
Tcf4 0.2857143 0.6455686 1.4853394 0.0310493 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.1947639 0
Elavl2 0.1428571 0.6300523 2.1108410 0.0377501 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.2055563 0
Ncoa1 0.1428571 0.6176416 2.0642131 0.0427795 STR Foxp1 Mt-rnr2 - Dcx 1.0000000 0.2108417 0
Gm38973 1.0000000 3.9417031 3.8329409 0.0000000 STR Foxp1 Mt-rnr2 - Gm38973 0.0000000 0.0000000 0
Dynlt3 0.1428571 2.3913677 6.4278768 0.0000000 STR Foxp1 Mt-rnr2 - Gm38973 0.0000000 0.0000000 0
Ecpas 0.2142857 1.7407608 4.1317772 0.0000000 STR Foxp1 Mt-rnr2 - Gm38973 0.0000019 0.0000006 0
Tmem33 0.1428571 1.2715433 3.8353602 0.0000214 STR Foxp1 Mt-rnr2 - Gm38973 0.0017975 0.0003595 0
Piezo2 0.1428571 1.2623748 3.8124354 0.0000201 STR Foxp1 Mt-rnr2 - Gm38973 0.0016878 0.0003595 0
Klhl2 0.1428571 1.1773997 3.6187229 0.0000648 STR Foxp1 Mt-rnr2 - Gm38973 0.0054428 0.0009071 0
Banf1 0.1428571 1.1505998 3.4545331 0.0003372 STR Foxp1 Mt-rnr2 - Gm38973 0.0283265 0.0040466 0
Ubxn7 0.1428571 1.0211446 3.1126302 0.0018732 STR Foxp1 Mt-rnr2 - Gm38973 0.1573473 0.0195314 0
Maged1 0.2142857 0.9390265 2.4713680 0.0025630 STR Foxp1 Mt-rnr2 - Gm38973 0.2152895 0.0215289 0
Herc2 0.1428571 0.9347247 2.8562927 0.0061457 STR Foxp1 Mt-rnr2 - Gm38973 0.5162399 0.0397108 0
Pias2 0.1428571 0.9320810 2.8489886 0.0057809 STR Foxp1 Mt-rnr2 - Gm38973 0.4855935 0.0397108 0
Reep1 0.1428571 0.9236658 2.9635604 0.0020927 STR Foxp1 Mt-rnr2 - Gm38973 0.1757827 0.0195314 0
Zfp280d 0.1428571 0.8476898 2.7554865 0.0046913 STR Foxp1 Mt-rnr2 - Gm38973 0.3940681 0.0358244 0
4930579P08Rik 0.1428571 0.8120819 2.5606173 0.0135858 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.0688949 0
Mkrn1 0.1428571 0.8113422 2.5878748 0.0109678 STR Foxp1 Mt-rnr2 - Gm38973 0.9212917 0.0614194 0
Tcf20 0.1428571 0.8045744 2.5507876 0.0139430 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.0688949 0
Nktr 0.1428571 0.7598738 2.4193806 0.0219833 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.0971894 0
Apba2 0.1428571 0.7095950 2.3035078 0.0253900 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.1038710 0
Grm7 0.2857143 0.6960011 1.6415877 0.0167383 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.0781121 0
Fmnl2 0.4285714 0.6901202 1.2886665 0.0108092 STR Foxp1 Mt-rnr2 - Gm38973 0.9079736 0.0614194 0
Cdc5l 0.1428571 0.6773099 2.1944230 0.0353053 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.1348021 0
Rpl38 0.1428571 0.6749554 2.1662341 0.0403072 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.1410751 0
Cers6 0.1428571 0.6555372 2.1981824 0.0259678 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.1038710 0
Tmem131l 0.1428571 0.6502449 2.1459469 0.0379440 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.1385780 0
Dync1li2 0.1428571 0.6199118 2.0680497 0.0440630 STR Foxp1 Mt-rnr2 - Gm38973 1.0000000 0.1466086 0
Gpc5 1.0000000 3.6031276 3.5550136 0.0000000 STR Foxp1 Mt-rnr2 - Gpc5 0.0000000 0.0000000 0
Marchf8 0.1071429 0.8369459 3.1702564 0.0002637 STR Foxp1 Mt-rnr2 - Gpc5 0.0163499 0.0054500 0
Map6 0.1071429 0.8080160 3.2504015 0.0000476 STR Foxp1 Mt-rnr2 - Gpc5 0.0029500 0.0014750 0
Ubl5 0.1071429 0.8035649 3.0366476 0.0005491 STR Foxp1 Mt-rnr2 - Gpc5 0.0340451 0.0085113 0
E130308A19Rik 0.1071429 0.6713091 2.6058295 0.0029954 STR Foxp1 Mt-rnr2 - Gpc5 0.1857154 0.0371431 0
Gm5095 0.1071429 0.5548113 2.1609311 0.0165650 STR Foxp1 Mt-rnr2 - Gpc5 1.0000000 0.1064906 0
Elavl4 0.1071429 0.5409868 2.1323040 0.0171759 STR Foxp1 Mt-rnr2 - Gpc5 1.0000000 0.1064906 0
Tsc22d3 0.1071429 0.5198843 2.1042923 0.0129233 STR Foxp1 Mt-rnr2 - Gpc5 0.8012442 0.1064906 0
Maml3.var1 0.1071429 0.5101454 2.0898665 0.0146220 STR Foxp1 Mt-rnr2 - Gpc5 0.9065664 0.1064906 0
Enah 0.1428571 0.5098653 1.7533292 0.0224700 STR Foxp1 Mt-rnr2 - Gpc5 1.0000000 0.1189670 0
Nsg1 0.1071429 0.5011379 2.0094807 0.0230259 STR Foxp1 Mt-rnr2 - Gpc5 1.0000000 0.1189670 0
Bpnt2 0.1071429 0.4969518 1.9716772 0.0288920 STR Foxp1 Mt-rnr2 - Gpc5 1.0000000 0.1377925 0
Csmd3.var1 0.1071429 0.4702238 1.8759549 0.0337171 STR Foxp1 Mt-rnr2 - Gpc5 1.0000000 0.1493186 0
Cdh23.var1 0.9285714 0.3037127 0.1640848 0.0043750 STR Foxp1 Mt-rnr2 - Gpc5 0.2712470 0.0452078 0
Tuba1a 1.0000000 1.8428242 1.7610008 0.0000000 STR Foxp1 Mt-rnr2 - Tuba1a 0.0000000 0.0000000 0
mt-Rnr2 0.8750000 0.1132833 0.0658952 0.0077278 STR Foxp1 Mt-rnr2 - Tuba1a 0.2241071 0.1120536 0
Wdr45b 1.0000000 4.3697324 4.0645517 0.0000000 STR Foxp1 Mt-rnr2 - Wdr45b 0.0000000 0.0000000 0
Gar1 0.1666667 1.7382213 4.5232297 0.0000001 STR Foxp1 Mt-rnr2 - Wdr45b 0.0000072 0.0000036 0
Spag16 0.2500000 1.5789960 3.5388834 0.0000026 STR Foxp1 Mt-rnr2 - Wdr45b 0.0001946 0.0000487 0
Pgap1 0.1666667 1.5379555 4.1006459 0.0000033 STR Foxp1 Mt-rnr2 - Wdr45b 0.0002471 0.0000494 0
Pten 0.1666667 1.5097624 3.9916420 0.0000127 STR Foxp1 Mt-rnr2 - Wdr45b 0.0009502 0.0001584 0
Zfp280d 0.2500000 1.4936221 3.5425955 0.0000007 STR Foxp1 Mt-rnr2 - Wdr45b 0.0000509 0.0000170 0
Ccdc85c 0.1666667 1.4576848 3.7839894 0.0000775 STR Foxp1 Mt-rnr2 - Wdr45b 0.0058160 0.0006643 0
Exoc6b.var1 0.1666667 1.3919145 3.7760224 0.0000350 STR Foxp1 Mt-rnr2 - Wdr45b 0.0026252 0.0003750 0
Ralgapa1 0.1666667 1.3879060 3.7043789 0.0000797 STR Foxp1 Mt-rnr2 - Wdr45b 0.0059784 0.0006643 0
Cops2 0.1666667 1.3092916 3.4444439 0.0005522 STR Foxp1 Mt-rnr2 - Wdr45b 0.0414131 0.0032992 0
Elavl2 0.2500000 1.2330673 2.9542652 0.0001129 STR Foxp1 Mt-rnr2 - Wdr45b 0.0084688 0.0008469 0
Rnf130 0.1666667 1.1928483 3.3078989 0.0006026 STR Foxp1 Mt-rnr2 - Wdr45b 0.0451950 0.0032992 0
Csnk1g3 0.1666667 1.1927343 3.3047555 0.0005832 STR Foxp1 Mt-rnr2 - Wdr45b 0.0437405 0.0032992 0
Camta1.var2 0.1666667 1.1285881 3.2222612 0.0006159 STR Foxp1 Mt-rnr2 - Wdr45b 0.0461894 0.0032992 0
Iffo2 0.1666667 1.0382252 3.0525058 0.0009828 STR Foxp1 Mt-rnr2 - Wdr45b 0.0737087 0.0049139 0
4930519F16Rik 0.1666667 1.0208051 2.9466744 0.0021519 STR Foxp1 Mt-rnr2 - Wdr45b 0.1613935 0.0089663 0
Crybg1 0.1666667 1.0095179 2.9696377 0.0015157 STR Foxp1 Mt-rnr2 - Wdr45b 0.1136796 0.0066870 0
Pabpc4 0.4166667 0.9677452 1.8468156 0.0013851 STR Foxp1 Mt-rnr2 - Wdr45b 0.1038834 0.0064927 0
Large1.var1 0.2500000 0.9196104 2.2973664 0.0038849 STR Foxp1 Mt-rnr2 - Wdr45b 0.2913678 0.0153351 0
Tspan3 0.1666667 0.8009510 2.3897569 0.0180281 STR Foxp1 Mt-rnr2 - Wdr45b 1.0000000 0.0617237 0
Nipbl 0.1666667 0.7934945 2.3811218 0.0186999 STR Foxp1 Mt-rnr2 - Wdr45b 1.0000000 0.0617237 0
Scamp1 0.1666667 0.7794029 2.3305819 0.0219351 STR Foxp1 Mt-rnr2 - Wdr45b 1.0000000 0.0685471 0
Arl3 0.1666667 0.7728043 2.3703514 0.0159511 STR Foxp1 Mt-rnr2 - Wdr45b 1.0000000 0.0598166 0
Gtf2ird2 0.1666667 0.7657077 2.3284916 0.0189286 STR Foxp1 Mt-rnr2 - Wdr45b 1.0000000 0.0617237 0
Ssrp1 0.1666667 0.7304665 2.2316252 0.0263277 STR Foxp1 Mt-rnr2 - Wdr45b 1.0000000 0.0773397 0
Fus 1.0000000 3.5026802 3.4766155 0.0000000 Unknow Mt-rnr2 - Fus 0.0000000 0.0000000 0
Mcfd2 0.1818182 2.1748678 5.0301692 0.0000000 Unknow Mt-rnr2 - Fus 0.0000001 0.0000000 0
Fars2.var1 0.1818182 1.9564334 4.6929697 0.0000000 Unknow Mt-rnr2 - Fus 0.0000017 0.0000006 0
Kctd20 0.1818182 1.5921151 3.9621851 0.0000123 Unknow Mt-rnr2 - Fus 0.0010674 0.0001779 0
Pura 0.1818182 1.5864146 4.1252625 0.0000012 Unknow Mt-rnr2 - Fus 0.0001028 0.0000257 0
Dars 0.1818182 1.5509548 4.0039404 0.0000050 Unknow Mt-rnr2 - Fus 0.0004369 0.0000874 0
Faf1.var1 0.1818182 1.4815944 3.7901000 0.0000340 Unknow Mt-rnr2 - Fus 0.0029558 0.0003807 0
Crk 0.1818182 1.3717939 3.5487201 0.0001417 Unknow Mt-rnr2 - Fus 0.0123303 0.0011209 0
Meis1.var1 0.1818182 1.3636715 3.6498502 0.0000350 Unknow Mt-rnr2 - Fus 0.0030458 0.0003807 0
Zfand3 0.1818182 1.3434292 3.4165534 0.0004464 Unknow Mt-rnr2 - Fus 0.0388371 0.0032364 0
Prr13 0.2727273 1.2645445 2.9205434 0.0001126 Unknow Mt-rnr2 - Fus 0.0097998 0.0009800 0
Rab6a 0.1818182 1.2595958 3.5364828 0.0000419 Unknow Mt-rnr2 - Fus 0.0036430 0.0004048 0
ENSMUSG00002075486 0.1818182 1.1643279 3.1634694 0.0008230 Unknow Mt-rnr2 - Fus 0.0715978 0.0055075 0
Kcnip4 0.1818182 1.1140624 3.0557069 0.0012352 Unknow Mt-rnr2 - Fus 0.1074656 0.0075571 0
Enc1 0.1818182 1.1135363 3.0225954 0.0017297 Unknow Mt-rnr2 - Fus 0.1504807 0.0088518 0
Gm34276 0.1818182 1.0849152 3.0210785 0.0013364 Unknow Mt-rnr2 - Fus 0.1162676 0.0075571 0
Erh 0.1818182 1.0595565 2.9209810 0.0025173 Unknow Mt-rnr2 - Fus 0.2190046 0.0121669 0
Xlr5a 0.1818182 1.0560974 2.9873121 0.0013898 Unknow Mt-rnr2 - Fus 0.1209138 0.0075571 0
Psmb4 0.1818182 1.0086749 2.7001730 0.0085790 Unknow Mt-rnr2 - Fus 0.7463743 0.0392829 0
Pfdn5 0.1818182 0.9023454 2.5289007 0.0111117 Unknow Mt-rnr2 - Fus 0.9667184 0.0460342 0
Gnao1 0.1818182 0.8550042 2.4176095 0.0159736 Unknow Mt-rnr2 - Fus 1.0000000 0.0579043 0
Hbb-y 0.1818182 0.8211518 2.4343352 0.0105828 Unknow Mt-rnr2 - Fus 0.9207040 0.0460342 0
Atg16l2 0.1818182 0.7801812 2.2209787 0.0310825 Unknow Mt-rnr2 - Fus 1.0000000 0.0970980 0
Nono 0.1818182 0.7590261 2.1891766 0.0312499 Unknow Mt-rnr2 - Fus 1.0000000 0.0970980 0
Nedd4 0.2727273 0.7327594 1.6616992 0.0442695 Unknow Mt-rnr2 - Fus 1.0000000 0.1271480 0
Hnrnpk 1.0000000 3.2602569 3.2672046 0.0000000 Unknow Mt-rnr2 - Hnrnpk 0.0000000 0.0000000 0
Cit 0.1428571 2.2854216 6.2775205 0.0000000 Unknow Mt-rnr2 - Hnrnpk 0.0000000 0.0000000 0
Baz2a 0.1428571 1.9805456 5.4689546 0.0000000 Unknow Mt-rnr2 - Hnrnpk 0.0000000 0.0000000 0
Prss40 0.1428571 1.7300389 4.9210516 0.0000000 Unknow Mt-rnr2 - Hnrnpk 0.0000003 0.0000001 0
Med4 0.1428571 1.6292230 4.4961311 0.0000009 Unknow Mt-rnr2 - Hnrnpk 0.0000834 0.0000167 0
Cacna1d.var1 0.1428571 1.4606201 4.1614775 0.0000052 Unknow Mt-rnr2 - Hnrnpk 0.0004892 0.0000815 0
Fam193b 0.1428571 1.3065480 3.7994016 0.0000648 Unknow Mt-rnr2 - Hnrnpk 0.0060907 0.0006767 0
Adcy2 0.1428571 1.2349765 3.6939184 0.0000648 Unknow Mt-rnr2 - Hnrnpk 0.0060907 0.0006767 0
Uchl5 0.1428571 1.2170187 3.5996211 0.0001611 Unknow Mt-rnr2 - Hnrnpk 0.0151407 0.0013621 0
Chd1 0.1428571 1.1613813 3.6773962 0.0000243 Unknow Mt-rnr2 - Hnrnpk 0.0022802 0.0003257 0
Frat1 0.1428571 1.1461011 3.3814040 0.0006320 Unknow Mt-rnr2 - Hnrnpk 0.0594105 0.0039607 0
Rab10 0.2142857 1.1146126 2.8884501 0.0002281 Unknow Mt-rnr2 - Hnrnpk 0.0214380 0.0016491 0
Smad4 0.1428571 1.1058702 3.3300511 0.0006742 Unknow Mt-rnr2 - Hnrnpk 0.0633766 0.0039610 0
Prickle2 0.1428571 1.1016333 3.5193663 0.0000746 Unknow Mt-rnr2 - Hnrnpk 0.0070099 0.0007010 0
Use1 0.1428571 1.0966583 3.4369902 0.0001739 Unknow Mt-rnr2 - Hnrnpk 0.0163455 0.0013621 0
Ube3c 0.1428571 1.0287137 3.2861337 0.0003878 Unknow Mt-rnr2 - Hnrnpk 0.0364579 0.0026041 0
Atxn2 0.1428571 1.0228044 3.1557289 0.0011299 Unknow Mt-rnr2 - Hnrnpk 0.1062129 0.0062478 0
Sdccag8 0.1428571 0.9566795 2.9668871 0.0029711 Unknow Mt-rnr2 - Hnrnpk 0.2792878 0.0135312 0
Herc1 0.1428571 0.9288965 2.9671746 0.0019801 Unknow Mt-rnr2 - Hnrnpk 0.1861321 0.0103407 0
Ppp1r12a 0.1428571 0.8972051 2.8347873 0.0043271 Unknow Mt-rnr2 - Hnrnpk 0.4067478 0.0176847 0
Pbx3 0.1428571 0.8780564 2.8428661 0.0030229 Unknow Mt-rnr2 - Hnrnpk 0.2841542 0.0135312 0
Nr2f2 0.1428571 0.8731187 2.8764575 0.0021709 Unknow Mt-rnr2 - Hnrnpk 0.2040639 0.0107402 0
Aff4 0.1428571 0.8471078 2.7986508 0.0032943 Unknow Mt-rnr2 - Hnrnpk 0.3096665 0.0140757 0
Ccny 0.1428571 0.8409319 2.6345888 0.0101721 Unknow Mt-rnr2 - Hnrnpk 0.9561763 0.0382471 0
Robo2.var1 0.2142857 0.8238933 2.2346352 0.0062330 Unknow Mt-rnr2 - Hnrnpk 0.5859031 0.0244126 0
Pabpc1 1.0000000 4.2088644 3.9276637 0.0000000 Unknow Mt-rnr2 - Pabpc1 0.0000000 0.0000000 0
Gm16580 0.3333333 2.4996296 4.4799754 0.0000000 Unknow Mt-rnr2 - Pabpc1 0.0000000 0.0000000 0
Ppp1ca 0.1666667 2.4754603 5.8433427 0.0000000 Unknow Mt-rnr2 - Pabpc1 0.0000000 0.0000000 0
Ndufa8 0.1666667 1.9163435 4.7141817 0.0000001 Unknow Mt-rnr2 - Pabpc1 0.0000086 0.0000022 0
Pcsk2 0.1666667 1.4874892 3.9504157 0.0000115 Unknow Mt-rnr2 - Pabpc1 0.0011932 0.0002386 0
Kctd20 0.1666667 1.2697302 3.6276872 0.0000394 Unknow Mt-rnr2 - Pabpc1 0.0041026 0.0005861 0
Scand1 0.1666667 1.2675592 3.6189099 0.0000383 Unknow Mt-rnr2 - Pabpc1 0.0039821 0.0005861 0
Nptn 0.1666667 1.2547575 3.4374869 0.0003373 Unknow Mt-rnr2 - Pabpc1 0.0350807 0.0038979 0
Ranbp2 0.1666667 1.1922718 3.4721819 0.0000939 Unknow Mt-rnr2 - Pabpc1 0.0097706 0.0012213 0
Strap 0.1666667 1.1052838 3.1026156 0.0015450 Unknow Mt-rnr2 - Pabpc1 0.1606800 0.0123600 0
Clns1a 0.1666667 1.0939748 3.0081745 0.0030512 Unknow Mt-rnr2 - Pabpc1 0.3173291 0.0176294 0
Arl1 0.1666667 1.0925122 3.0105317 0.0029994 Unknow Mt-rnr2 - Pabpc1 0.3119424 0.0176294 0
Eif4e 0.1666667 1.0682634 3.0182081 0.0023129 Unknow Mt-rnr2 - Pabpc1 0.2405467 0.0160364 0
Ralgps2 0.1666667 1.0627521 3.1422793 0.0007166 Unknow Mt-rnr2 - Pabpc1 0.0745215 0.0074522 0
Carhsp1 0.1666667 1.0471152 3.0681336 0.0010446 Unknow Mt-rnr2 - Pabpc1 0.1086384 0.0098161 0
Dnajc5 0.1666667 1.0233151 2.8850277 0.0043909 Unknow Mt-rnr2 - Pabpc1 0.4566566 0.0240346 0
Hp1bp3 0.2500000 1.0119014 2.4482569 0.0019765 Unknow Mt-rnr2 - Pabpc1 0.2055586 0.0146828 0
Fam32a 0.1666667 0.9983422 2.9990726 0.0011326 Unknow Mt-rnr2 - Pabpc1 0.1177928 0.0098161 0
Ahr 0.1666667 0.9540885 2.8556410 0.0025753 Unknow Mt-rnr2 - Pabpc1 0.2678281 0.0167393 0
Pcbp2 0.1666667 0.9418027 2.7084666 0.0075042 Unknow Mt-rnr2 - Pabpc1 0.7804399 0.0339322 0
Rps16 0.2500000 0.9038339 2.1980011 0.0062207 Unknow Mt-rnr2 - Pabpc1 0.6469538 0.0309469 0
Psap 0.1666667 0.8886384 2.6595054 0.0062489 Unknow Mt-rnr2 - Pabpc1 0.6498852 0.0309469 0
Dynll2 0.2500000 0.8773587 2.0993908 0.0114460 Unknow Mt-rnr2 - Pabpc1 1.0000000 0.0439080 0
Rpl34 0.1666667 0.8537106 2.5781946 0.0083691 Unknow Mt-rnr2 - Pabpc1 0.8703848 0.0362660 0
Ap3d1 0.1666667 0.8481649 2.5403343 0.0102047 Unknow Mt-rnr2 - Pabpc1 1.0000000 0.0424517 0
Rpl18a-ps1 0.5000000 4.3107524 5.3509468 0.0000000 Unknow Mt-rnr2 - Rpl18a 0.0000000 0.0000000 0
Gm15427 0.7000000 4.1571013 4.5780943 0.0000000 Unknow Mt-rnr2 - Rpl18a 0.0000000 0.0000000 0
Rpl18a 1.0000000 3.8952739 3.7330294 0.0000000 Unknow Mt-rnr2 - Rpl18a 0.0000000 0.0000000 0
Rpl18-ps1 0.4000000 3.3323674 4.9599065 0.0000000 Unknow Mt-rnr2 - Rpl18a 0.0000000 0.0000000 0
Psma6 0.5000000 2.4452812 3.6387050 0.0000000 Unknow Mt-rnr2 - Rpl18a 0.0000000 0.0000000 0
Sntb1.var1 0.2000000 2.3350275 5.1215550 0.0000000 Unknow Mt-rnr2 - Rpl18a 0.0000000 0.0000000 0
Ctla4 0.3000000 2.0205573 3.8762161 0.0000001 Unknow Mt-rnr2 - Rpl18a 0.0000075 0.0000011 0
Prdx1 0.2000000 1.8631171 4.2725005 0.0000011 Unknow Mt-rnr2 - Rpl18a 0.0000715 0.0000089 0
Ndufb11 0.2000000 1.8123814 4.1528609 0.0000040 Unknow Mt-rnr2 - Rpl18a 0.0002543 0.0000254 0
Prkd3 0.2000000 1.6771274 4.0165136 0.0000038 Unknow Mt-rnr2 - Rpl18a 0.0002409 0.0000254 0
Sestd1 0.2000000 1.6111328 3.8302953 0.0000278 Unknow Mt-rnr2 - Rpl18a 0.0017802 0.0001618 0
Eml4 0.2000000 1.3297020 3.3822589 0.0002224 Unknow Mt-rnr2 - Rpl18a 0.0142352 0.0010950 0
Kif5c 0.3000000 1.3090575 2.8441438 0.0001716 Unknow Mt-rnr2 - Rpl18a 0.0109795 0.0009150 0
Rps26 0.3000000 1.2579056 2.7108339 0.0004421 Unknow Mt-rnr2 - Rpl18a 0.0282970 0.0020212 0
Cacna2d1 0.2000000 1.2327661 3.1545131 0.0008971 Unknow Mt-rnr2 - Rpl18a 0.0574147 0.0036632 0
Gm19583 0.2000000 1.1986585 3.1084396 0.0009158 Unknow Mt-rnr2 - Rpl18a 0.0586111 0.0036632 0
Maml3.var1 0.2000000 1.1974000 3.0769412 0.0013216 Unknow Mt-rnr2 - Rpl18a 0.0845847 0.0045397 0
Sars 0.2000000 1.1923306 3.0660836 0.0012462 Unknow Mt-rnr2 - Rpl18a 0.0797548 0.0045397 0
Cuedc2 0.2000000 1.1707192 3.0438276 0.0013477 Unknow Mt-rnr2 - Rpl18a 0.0862537 0.0045397 0
Naa15 0.2000000 1.0830471 2.8118751 0.0041257 Unknow Mt-rnr2 - Rpl18a 0.2640475 0.0125737 0
Rock1 0.2000000 1.0659425 2.8525507 0.0024543 Unknow Mt-rnr2 - Rpl18a 0.1570777 0.0078539 0
Sema3c.var1 0.2000000 1.0456276 2.7087538 0.0061389 Unknow Mt-rnr2 - Rpl18a 0.3928882 0.0159700 0
Lsamp.var1 0.3000000 0.9964137 2.2004219 0.0052230 Unknow Mt-rnr2 - Rpl18a 0.3342697 0.0145335 0
Rplp0 0.3000000 0.9852542 2.1818085 0.0047796 Unknow Mt-rnr2 - Rpl18a 0.3058964 0.0139044 0
Rpl11 0.3000000 0.9706578 2.1553832 0.0062383 Unknow Mt-rnr2 - Rpl18a 0.3992495 0.0159700 0
Gm10717 1.0000000 3.3760614 3.6595943 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Nlrp4c 0.1818182 3.1580445 6.7938311 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Dennd5a 0.1818182 2.5512130 5.7735176 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Necap1 0.1818182 2.5244101 5.7492165 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Gm11168 0.5454545 2.4734584 3.8198368 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Megf9 0.3636364 2.4024242 4.4004432 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Mtbp 0.1818182 2.3650760 5.6166324 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Chrac1 0.1818182 2.3613868 5.3565077 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
St6galnac3.var1 0.1818182 2.3040397 5.5557138 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Gm10718 0.8181818 2.2877759 2.9944780 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Gm10722 0.8181818 2.2474794 2.9133181 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Dclk2 0.3636364 2.1706085 3.9667068 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Gm10719 0.5454545 2.0975259 3.3503779 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Plce1.var1 0.1818182 2.0961939 5.1343974 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Lingo2.var1 0.1818182 2.0924501 5.1219460 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Dhx35 0.1818182 2.0322799 5.0736517 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
2310014F06Rik 0.1818182 1.9900911 4.8611201 0.0000000 Unknow Psmc2 - Gm10717 0.0000004 0.0000000 1
Scn8a 0.1818182 1.9686340 4.6823779 0.0000000 Unknow Psmc2 - Gm10717 0.0000070 0.0000002 1
Slu7 0.1818182 1.9527180 4.8360431 0.0000000 Unknow Psmc2 - Gm10717 0.0000004 0.0000000 1
Dnah7c 0.1818182 1.9521876 4.9872578 0.0000000 Unknow Psmc2 - Gm10717 0.0000000 0.0000000 1
Gm33838 0.6363636 1.9335254 2.9283219 0.0000000 Unknow Psmc2 - Gm10717 0.0000002 0.0000000 1
Iqcm 0.2727273 1.9327767 4.0176145 0.0000000 Unknow Psmc2 - Gm10717 0.0000054 0.0000002 1
Atad1 0.2727273 1.9253280 4.1345798 0.0000000 Unknow Psmc2 - Gm10717 0.0000004 0.0000000 1
Gm10801 0.8181818 1.9060194 2.4748098 0.0000000 Unknow Psmc2 - Gm10717 0.0000005 0.0000000 1
Gm17535 0.3636364 1.8902424 3.7050734 0.0000000 Unknow Psmc2 - Gm10717 0.0000001 0.0000000 1


8.4 Heatmap of cell subtypes - log(CPM + 1)

8.5 Heatmap of cell subtypes - scale(log(CPM + 1))




9 Disclaimer

The analysis was performed through the non-profit and open-source pipeline JSEQ_scRNAseq. Remember, in silico analysis must be validated in vitro or in vivo. For more information, visit GitHub or contact us. JSEQ_scRNAseq was created at the Institute of Bioorganic Chemistry, Polish Academy of Sciences.